Bacteria, and specifically pathobionts, accumulate on both surgical and more so on cotton face masks after 4 h of wearing. When the same face masks are worn for longer periods of time, surgical masks might be a better option due to a lower bacterial load. In addition, surgical face masks should probably best be disposed of after every use and cotton face masks should be properly sterilized. The latter can be efficiently done by boiling at 100°C, washing at 60°C with detergent, and ironing using a steam iron. More research is required to investigate whether mask use beyond 4 h could lead to a dysbiosis in the skin and nasal microbiome and be associated to conditions such as acne. This research emphasizes that face masks should be better evaluated to weigh the risks of disease transmission rate against other biosafety risks such as bacterial overgrowth, especially in vulnerable populations and in situations where physical distancing and proper ventilation are available.